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Role of RNA silencing in plant-viroid interactions and in viroid pathogenesis

2023 Virus Research
Volume:
323
Initial page:
-
End page:
-
Authors:
Di Serio, F.;Owens, R.A.;Navarro, B.;Serra, P.;Martínez de Alba, Á.E.;Delgado, S.;Carbonell, A.;Gago-Zachert, S.

Transgene-free, virus-based gene silencing in plants by artificial microRNAs derived from minimal precursors

2023 Nucleic Acids Research
Volume:
51
Initial page:
10719
End page:
10736
Authors:
Cisneros, A.E.;Martín-García, T.;Primc, A.;Kuziuta, W.;Sánchez-Vicente, J.;Aragonés, V.;Daròs, J.A.;Carbonell, A.

Downregulation of Tomato UDP-Glucose:Sterol Glycosyltransferase 1 Perturbs Plant Development and Facilitates Viroid Infection

2023 Journal of Experimental Botany
Volume:
74
Initial page:
1564
End page:
1578
Authors:
Cisneros AE;Lisón P;Campos L;López-Tubau JM;Altabella T;Ferrer A;Daròs JA;Alberto Carbonell

In memorian of Ricardo Flores: the career, achievements, and legacy of an inspirational plant virologist.

2022 Virus Research
Volume:
312
Initial page:
198718
End page:
-
Authors:
Vicente Pallás;Carmen Hernández;Jose Francisco Marcos;José-Antonio Daròs;Silvia Ambros;Beatriz Navarro;José Antonio Navarro;Marcos de la Peña;Selma Gago-Zachert;María Eugenia Gas;Alberto Carbonell;Car...et all

RNAi tools for controlling viroid diseases

2022 Virus Research
Volume:
313
Initial page:
-
End page:
-
Authors:
Carbonell, A.

Systemic silencing of an endogenous plant gene by two classes of mobile 21-nucleotide artificial small RNAs

2022 Plant Journal
Volume:
110
Initial page:
1166
End page:
1181
Authors:
Cisneros, A.E.;de la Torre-Montaña, A.;Carbonell, A.

Diagnostics of Infections Produced by the Plant Viruses TMV, TEV, and PVX with CRISPR-Cas12 and CRISPR-Cas13

2022 ACS Synthetic Biology
Volume:
11
Initial page:
2384
End page:
2393
Authors:
Marqués, María-Carmen;Sánchez-Vicente, Javier;Ruiz, Raúl;Montagud-Martínez, Roser;Márquez-Costa, Rosa;Gómez, Gustavo;Carbonell, Alberto;Daròs, José-Antonio.;Rodrigo, Guillermo

Art-sRNAi for enhanced antiviral resistance in plants

2020 Scholarly Community Encyclopedia
Volume:
-
Initial page:
-
End page:
-
Authors:
Adriana Cisneros;Alberto Carbonell

Intact RNA structurome reveals mRNA structure-mediated regulation of miRNA cleavage in vivo

2020 Nucleic Acids Research
Volume:
48
Initial page:
8767
End page:
8781
Authors:
Yang, M.;Woolfenden, H.C.;Zhang, Y.;Fang, X.;Liu, Q.;Vigh, M.L.;Cheema, J.;Yang, X.;Norris, M.;Yu, S.;Carbonell, A.;Brodersen, P.;Wang, J.;Ding, Y.

Fine-tune control of targeted RNAi efficacy by plant artificial small RNAs

2020 Nucleic Acids Research
Volume:
48
Initial page:
6234
End page:
6250
Authors:
López-Dolz, L.;Spada, M.;Daròs, J.A.;Carbonell, A.

Artificial small RNA-based silencing tools for antiviral resistance in plants

2020 Plants
Volume:
9
Initial page:
-
End page:
-
Authors:
Cisneros, A.E.;Carbonell, A.

Symptomatic plant viroid infections in phytopathogenic fungi: A request for a critical reassessment

2020 Proceedings of the National Academy of Sciences of the United States of America
Volume:
117
Initial page:
10126
End page:
10128
Authors:
Serra, P.;Carbonell, A.;Navarro, B.;Gago-Zachert, S.;Li, S.;Di Serio, F.;Flores, R.

Multi-targeting of viral RNAs with synthetic trans-acting small interfering RNAs enhances plant antiviral resistance

2019 Plant Journal
Volume:
100
Initial page:
720
End page:
737
Authors:
Carbonell, A.;Lisón, P.;Daròs, J.A.

Identification and Characterization of Stress-Responsive TAS3-Derived TasiRNAs in Melon

2019 Plant and Cell Physiology
Volume:
60
Initial page:
2382
End page:
2393
Authors:
Cervera-Seco, L.;Marques, M.C.;Sanz-Carbonell, A.;Marquez-Molins, J.;Carbonell, A.;Daros, J.A.;Gomez, G.

Secondary small interfering RNA-based silencing tools in plants: An update

2019 Frontiers in Plant Science
Volume:
10
Initial page:
-
End page:
-
Authors:
Carbonell, A.

Fast-Forward Identification of Highly Effective Artificial Small RNAs Against Different Tomato spotted wilt virus Isolates

2019 Molecular Plant-Microbe Interactions
Volume:
32
Initial page:
142
End page:
156
Authors:
Carbonell, A.;López, C.;Daròs, J.A.

Artificial microRNAs and synthetic trans-acting small interfering RNAs interfere with viroid infection.

2017 Molecular Plant Pathology
Volume:
18
Initial page:
746
End page:
753
Authors:
Carbonell A.;J.A. Daròs

Dicer-like 4 is involved in restricting the systemic movement of Zucchini yellow mosaic virus in Nicotiana benthamiana.

2017 Molecular Plant-Microbe Interactions
Volume:
30
Initial page:
63
End page:
71
Authors:
Cordero T.;Cerdán L.;Carbonell A.;Katsarou K.;Kalantidis K.;J.A. Daròs

A viral suppressor of RNA silencing inhibits ARGONAUTE 1 function by precluding target RNA binding to pre-assembled RISC

2017 Nucleic Acids Research
Volume:
45
Initial page:
7736
End page:
7750
Authors:
Kenesi, E.;Carbonell, A.;Lózsa, R.;Vértessy, B.;Lakatos, L.

Plant Virus RNA Replication

2016 Encyclopedia of Life Sciences
Volume:
a0022338
Initial page:
1
End page:
13
Authors:
Alberto Carbonell;Juan Antonio García;Carmen Simón-Mateo;Carmen Hernández

Fast-forward generation of effective artificial small RNAs for enhanced antiviral defense in plants.

2016 RNA & Disease
Volume:
3
Initial page:
e1130
End page:
-
Authors:
Carbonell A.;J.C. Carrington;J.A. Daròs

Highly specific gene silencing in a monocot species by artificial microRNAs derived from chimeric MIRNA precursors

2015 Plant Journal
Volume:
82
Initial page:
1061
End page:
1075
Authors:
Carbonell, Alberto;Fahlgren, Noah;Mitchell, Skyler;Cox Jr., Kevin L.;Reilly, Kevin C.;Mockler, Todd C.;Carrington, James C

Roles and programming of Argonaute proteins during Turnip mosaic virus infection

2015 PLoS Pathogens
Volume:
11
Initial page:
e1004755
End page:
-
Authors:
Garcia-Ruiz, H.G.;Carbonell, A.;Hoyer, J.S.;Fahlgren, N.;Gilbert, K.B.;Takeda, A.;Giampetruzzi, A.;Garcia-Ruiz, M.T.;Lottes, M.M.;Lowery, N.;Martinez-Albaladejo, M.T.;Carrington, J.C.

Trading defence for vigour

2015 Nature Plants
Volume:
1
Initial page:
-
End page:
-
Authors:
Carbonell, A.

P-SAMS: A web site for plant artificial microRNA and synthetic trans-acting small interfering RNA design

2015 Bioinformatics
Volume:
32
Initial page:
157
End page:
158
Authors:
Fahlgren, N.;Hill, S.T.;Carrington, J.C.;Carbonell, A.

Molecular Ecology: Trading defence for vigour

2015 Nature Plants
Volume:
1
Initial page:
1
End page:
2
Authors:
Carbonell, A.

Antiviral roles of plant ARGONAUTES

2015 Current Opinion in Plant Biology
Volume:
27
Initial page:
111
End page:
117
Authors:
Carbonell, A.;Carrington, J.C.

The Potyviridae P1a leader protease contributes to host range specificity

2015 Virology
Volume:
476
Initial page:
264
End page:
270
Authors:
Shan, H.;Pasin, F.;Valli, A.;Castillo, C.;Rajulu, C.;Carbonell, A.;Simón-Mateo, C.;García, J.A.;Rodamilans, B.

Viroids, the simplest RNA replicons: How they manipulate their hosts for being propagated and how their hosts react for containing the infection

2015 Virus Research
Volume:
209
Initial page:
136
End page:
145
Authors:
Flores, R.;Minoia, S.;Carbonell, A.;Gisel, A.;Delgado, S.;López-Carrasco, A.;Navarro, B.;Di Serio, F.

Specific argonautes selectively bind small RNAs derived from potato spindle tuber viroid and attenuate viroid accumulation in vivo

2014 Journal of Virology
Volume:
88
Initial page:
11933
End page:
11945
Authors:
Minoia, S.;Carbonell, A.;Di Serio, F.;Gisel, A.;Carrington, J.C.;Navarro, B.;Flores, R.

Preparation of multiplexed small RNA libraries from plants

2014 Bio-protocol
Volume:
-
Initial page:
-
End page:
-
Authors:
Gilbert, K.B.;Fahlgren, N.;Kasschau, K.D.;Chapman, E. J.;Carrington, J.C.;Carbonell, A.

Argonaute PIWI domain and microRNA duplex structure contribute to small RNA sorting in Arabidopsis.

2014 Nature Communications
Volume:
5
Initial page:
5468
End page:
-
Authors:
Zhang, X.;Niu, D.;Carbonell, A.;Wang. A.;Lee, A.;Tun, V.;Wang, Z.;Carrington, J.C.;Chang, C.A.;Jin, H.

Diverse amino acid changes at specific positions in the N-terminal region of the coat protein allow plum pox virus to adapt to new hosts

2013 Molecular Plant-Microbe Interactions
Volume:
26
Initial page:
1211
End page:
1224
Authors:
Carbonell, A.;Maliogka, V.I.;De Jesús Pérez, J.;Salvador, B.;San León, D.;García, J.A.;Simón-Mateo, C.

Virus variants with differences in the p1 protein coexist in a plum pox virus population and display particular host-dependent pathogenicity features

2012 Molecular Plant Pathology
Volume:
13
Initial page:
877
End page:
886
Authors:
Maliogka, V.I.;Salvador, B.;Carbonell, A.;Sáenz, P.;León, D.S.;Oliveros, J.C.;Delgadillo, M.O.;García, J.A.;Simón-Mateo, C.;Progenika Biopharma, S.A.

Functional analysis of three Arabidopsis ARGONAUTES using slicer-defective mutants

2012 Plant Cell
Volume:
24
Initial page:
3613
End page:
3629
Authors:
Carbonell, A.;Fahlgren, N;García-Ruíz, H.;Gilbert, K.B.;Montgomery T.A.;Nguyen, T.;Cuperus, J.T.;Carrington, J.C.

The Cucumber vein yellowing virus silencing suppressor P1b can functionally replace HCPro in Plum pox virus infection in a host-specific manner

2012 Molecular Plant-Microbe Interactions
Volume:
25
Initial page:
151
End page:
164
Authors:
Carbonell, A. ; Dujovny, G. ; García, J.A. ; Valli, A.

Heterologous RNA-silencing suppressors from both plant- and animal-infecting viruses support plum pox virus infection

2012 Journal of General Virology
Volume:
93
Initial page:
1601
End page:
1611
Authors:
Maliogk, V.I.;Calvo, M.;Carbonel, A.;García, J.A.;Valli, A.

Trans-cleaving hammerhead ribozymes with tertiary stabilizing motifs: In vitro and in vivo activity against a structured viroid RNA

2011 Nucleic Acids Research
Volume:
39
Initial page:
2432
End page:
2444
Authors:
Carbonell, A.;Flores, R.;Gago, S.

Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis

2010 Nature Structural and Molecular Biology
Volume:
17
Initial page:
997
End page:
1003
Authors:
Cuperus, J.T.;Carbonell, A.;Fahlgren, N.;Garcia-Ruiz, H.;Burke, R.T.;Takeda, A.;Sullivan, C.M.;Gilbert, S.D.;Montgomery, T.A.;Carrington, J.C.

Viroid replication: rolling-circles, enzymes and ribozymes

2009 VIRUSES
Volume:
1
Initial page:
317
End page:
334
Authors:
Flores, R.;Gas, M.E.;Molina-Serrano, D.;Nohales, M.A.;Carbonell, A.;Gago, S.;De la Peña, M.;Daros, J.A.

Double-stranded RNA interferes in a sequence-specific manner with the infection of representative members of the two viroid families

2008 Virology
Volume:
371
Initial page:
44
End page:
53
Authors:
Carbonell, A. ; Martínez de Alba, Á.-E. ; Flores, R. ; Gago, S.

Effects of the trinucleotide preceding the self-cleavage site on eggplant latent viroid hammerheads: Differences in co- and post-transcriptional self-cleavage may explain the lack of trinucleotide AUC in most natural hammerheads

2006 Nucleic Acids Research
Volume:
34
Initial page:
5613
End page:
5622
Authors:
Carbonell, A. ; De la Peña, M. ; Flores, R. ; Gago, S.

Viroids: the minimal non-coding RNAs with autonomous replication

2004 FEBS Letters
Volume:
567
Initial page:
42
End page:
48
Authors:
Ricardo Flores;Sonia Delgado;Maria Eugenia Gas;Alberto Carbonell;Diego Molina;Selma Gago;Marcos de la Peña

White Paper 6: Sustainable Primary Production

Year:
2021
ISBN:
978-84-00-10748-2
Editorial:
-
Authors:
Jesús Marco de Lucas;M. Victoria Moreno-Arribas;Enrique Olmos Aranda;Mónica Venegas Calerón;Carmen Castañeda;Ignasi Bartomeus;Javier Sanz Cañada;Lorena Gómez Aparicio;Eduarda Molina Alcaide;Gabriel Na...et all